Package index

All functions

all_duplicates() stable

duplication check

calc_flux_manual() experimental

Flux calculator (legacy version)

calc_flux_manual2() experimental

PriEco8800 Flux calculator

cm_aggregate() experimental

cm-wise aggregation of soil data

colorblind_safe_colors() stable

get ggthemes discrete colorblind-safe colors

compute_TOCstock()

UNSTABLE Stock calculation from soil profile

conf_95() deprecated

confidence band calculator

evaluate_model_adjusted() stable

Calculate a range of evaluation metrics

evaluate_model_batch() experimental

model evaluation (BDF-SSL)

eval_SEMACHv3() experimental

eval_SEMACHv3

fill_missing_layers()

UNSTABLE Fill missing soil horizon intervals by linear interpolation

fix_soliTOC_colnames() experimental

Fix soliTOC csv colnames

get_best() experimental

get best model for variable based on metric

get_dayfactors() stable

get dayfactors

gg_color_hue() stable

ggplot default color emulator

label_creator() stable

label_creator

load_pri8800_data() experimental

load Pri8800 data

load_SEMACHv3_file() experimental

load_SEMACHv3_file

load_SEMACHv3_raw() experimental

laod_SEMACHv3_raw

ME() stable

mean error

none() stable

none

OPUSraw_to_Preprocessed() stable

Load and pre-process OPUS raw spectra files (file.O)

plot_spc() stable

plot spectra

predict_variable() superseded

predict variable (BDF-SSL framework, legacy version)

predict_variable2() experimental

predict variable (generalised)

pull_set_soliTOC() stable

pull_set_soliTOC

R2() stable

degree of determination

readPangaea()

read Pangaea delimited text data with header

rename_flags() experimental

Rename flag columns

RMSE() stable

root mean squared error

SEMACHv3_batch_evaluation() experimental

SEMACHv3 batch evaluation

SEMACHv3_calib() experimental

SEMACHv3 SCD30 Calibration

SEMACHv3_plotRes() experimental

SEMACHv3 plot results

SEMACHv3_plot_raw() experimental

SEMACHv3 raw data plotter

soliTOC_remove_duplicates() stable

duplicate filtering

spectra_plotter() experimental

Spectra plotter

Spectro_batch_load() experimental

Spectrolyzer data loader

Spectro_load_fingerprint() experimental

Spectrolyzer fingerprint loader

Spectro_load_parameter() experimental

Spectrolyzer parameter loader

Spectro_merge_col() experimental

Merge fingerprint and parameter data

spike_with() stable

isotopic tracer calculator

summarise_metrics() stable

basic statistics summary

train_sample_size() experimental

Sample size effect on model accuracy estimator

unzip_local() experimental

Unzip helper

val_train_size() experimental

val_train_size

wavenumber_wavelength() stable

wavenumber-wavelength converter

yr_frac() stable

Date to years after start